====== Arbeitsgruppenseminar Genominformatik Sommersemester 2008 ======
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|392188 |Hoffmann, Stoye |Summer 2008 |Thursday 16-18 in U10-146 |[[http://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=6602378|ekvv]] |

===== Course Description =====
In this seminar, current topics of the Genome Informatics research group are presented. 

(In dieser Veranstaltung wird in Vorträgen über aktuelle Themen aus der Forschung der Arbeitsgruppe Genominformatik berichtet.) 



===== Schedule =====

| **Date** | **Name** | **Topic** |
| April 10th, 2008 | Janna Berkemann, Péter Erdõs | Bachelor thesis kickoff: ..., New developments in the mathematics of phylogeny |
| April 24th, 2008 | Wolfgang Gerlach, Nils Hoffmann | BREW 2008 rehearsal: Taxonomical and Functional Characterization of Ultra-Short Reads from Microbial Metagenomes using the q-Gram Index, BREW 2008 rehearsal: Dynamic Time Warping in Chromatography Mass-Spectrometry |
| April 30th, 2008 | Johannes Linnemann | Diploma thesis presentation: Robustness of genomes under inversion |
| May 8th, 2008 | Roland Wittler | Jurassic Genomics |
| May 15th, 2008 | Alexander Bunkowski, Sita Lange| Visualization, Alignment and Data Mining for MCC/IMS Signals, Master thesis presentation: FORCE2 - A Weighted Graph Cluster Editing Tool using Layout-Based Heuristics |
| May 29th, 2008 | Julia Zakotnik | CPM 2008 rehearsal: HP Distance via Double Cut and Join Distance, COCOON 2008 rehearsal: Genome Halving under DCJ revisited |
| June 5th, 2008 | Gero Doose, Phillip Torkler, Sören Müller | Bachelor thesis presentation: ... |
| June 12th, 2008 | Epameinondas, Fritzilas, Jose, Amgarten, Quitzau | COCOON 2008 rehearsal: Structural Identifiability in Low-Rank Matrix Factorization, WABI 2008 rehearsal: Detecting Repeat Families in Incompletely Sequenced Genoes |
| June 26th, 2008 | Jan Baumbach | IB08 rehearsal: MoRAine - A web server for fast computational transcription factor binding motif re-annotation |
| July 3rd, 2008 | Kai Engelmann, Yoan Diekmann | Bachelor thesis kickoff: Mure-Cola - Multiple Reference Contig Layout, Diploma thesis presentation: An Algorithm for Approximate Gene Cluster Detection |
| July 10th, 2008 | Léon Kuchenbecker, Peter Husemann | Bachelor thesis kickoff: Center Gene Clusters, Contig Mapping using a q-Gram Index |
| July 15th, 2008, 11:15 | Wolfgang Gerlach | ISMB SHORT-SIG Rehearsal: Taxonomical and Functional Characterization of Ultra-Short Reads From Microbial Metagenomes and Examination of Mate-Pairs |
| July 17th, 2008 | Sebastian Oehm, Martin Riese | Comparative metabolic pathway analysis, Bachelor thesis presentation: ... |
| July 31st, 2008 | Marcin Kaminski | The game of Cops and Robber on graphs |
| August 7th, 2008 | Martin Milanic | MFCS Rehearsal: The Maximum Independent Set Problem in Planar Graphs |
| September 25th, 2008 | Patrick Schwientek | Master thesis presentation: Genome scale expression analysis of left ventricular assist devices (VAD) pre and post mechanical unloading |Back to [[:Teaching|Teaching]]