====== Combinatorics of Genome Rearrangements (Seminar in SS 2010) ======
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|392171 |Marilia Braga | Mi 14-16 | U10-146 |[[http://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=16762765|ekvv]] |

==== Office Hours: ====
every Wednesday from 16.00 to 17.00 in room U10-141 



==== Calendar: ====

|14.04.2010 | Introduction | Marilia |
|21.04.2010 | Organization | Marilia |
|28.04.2010 | --- | |
|05.05.2010 | Common Intervals | Nicole & Svea |
|12.05.2010 | DCJ | Julia & Linda |
|12.05.2010 | Genome Halving under DCJ | Benedikt & Sebastian |
|19.05.2010 | --- | Dies academicus|
|26.05.2010 | Block-interchanges | Denis & Lisa-Maria |
|02.06.2010 | Sorting by reversals | Lina, Maureen & Farrin |
|09.06.2010 | Perfect DCJ rearrangements | Niclas & Hakan |
|09.06.2010 | Perfect sorting by reversals | Robert & Henry |
|16.06.2010 | Perfect reversal median | Christian, Philipp & Ansgar |
|23.06.2010 | Multichromosomal genome median and halving problems | Sarah, Konstantin & Stanislaw |
|30.06.2010 | --- | |
|07.07.2010 | Sorting a bridge hand | Dominic & Erwin |
|14.07.2010 | On the Toric Graph as a Tool to Handle the Problem of Sorting by Transpositions | Nina & Jennifer |
|21.07.2010 | Deadline for the first version of the report | All |

==== Rules: ====
Oral presentations take 20+20 minutes (groups of 2) or 15+15+15 minutes (groups of 3). Every group writes a written summary of 15 pages (groups of 2) or 18 pages (groups of 3). The first version has to be handed in by July 21, 2010. 



==== Topics: ====
In this seminar we will see combinatoric approaches for problems involving large scale genome rearrangements, such as inversions, fusions, fissions, translocations, block-interchanges and transpositions: 


  * Genomic distance and sorting 
  * Genome halving 
  * Median of three genomes 
  * Common intervals 
  * ... 
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