====== Arbeitsgruppenseminar Genominformatik ======
\\ 


|392188 |Stoye |Winter 2011/12 |Thursday 16-18 in U10-146 |[[http://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=25664351|ekvv]] |

===== Course Description =====
In this seminar, current topics of the Genome Informatics research group are presented. 

(In dieser Veranstaltung wird in Vorträgen über aktuelle Themen aus der Forschung der Arbeitsgruppe Genominformatik berichtet.) 



===== Schedule =====

|  **Date** | **Topic**  | **Name** |
| 13.10.2011 | Bachelor thesis final presentations\\Project presentation| Svea Kokott, Juri Ritter, Corinna Sickinger, Stanislaw Loschitzki\\ Konstantin Otte |
| 20.10.2011 | --- | (Jens in Berlin) |
| 27.10.2011 | --- | (Jens in Aarhus) |
| 03.11.2011 | Detektion von einzelnen DNA-Molekülen mittels laserinduzierter Fluoreszenz - Ein biophotonischer Ansatz | Idir Yahiatene |
| 10.11.2011 | Organizational matters | Jens Stoye |
| 17.11.2011 | Dynamic FM-Index for a Collection of Texts with Application to Space-efficient Construction of the Compressed Suffix Array.  | Wolfgang Gerlach |
| 24.11.2011 | Sequence analysis of the Rhizottia solani AG1-IB genome with emphasis on fungal pathogencity determinants | Daniel Wibberg |
| 01.12.2011 | Functional Gene Cluster Detection | Daniel Dörr |
| 08.12.2011 | DNA compression | Sascha McSporran |
| 15.12.2011\\at **15:15** | Sampling DCJ scenarios | Eyla Willing |
| 22.12.2011 | --- | almost christmas break |
| 29.12.2011 | --- | christmas break |
| 05.01.2012 | --- | christmas break |
| 12.01.2012 | Using BWT, run-length encoding and Huffman encoding to compress large read sets | Tobias Jakobi |
| 19.01.2012 | --- | (Jens in Paris) |
| 26.01.2012 | [[internal:sequenceworkshop2012|SequenceWorkshop2012]] |  |
| 02.02.2012 |  Methods for the analysis of metatranscriptomes \\ Progress in the genome project of the phytopathogenic fungus Rhizoctonia solani AG1-IB|Christina Ander \\Lukas Jelonek     |
| 09.02.2012 | MGX - A flexible metagenome annotation platform | Sebastian Jaenicke |
| 05.03.2012\\at **13:15** | On the relation between gene organization, functional gene groups and cancer | Annelyse Thévenin |
| 15.03.2012 | Mining phenotype-genotype association data | Alexander Berhörster |
| 29.03.2012 | A stochastic model of the T-cell activation | Robert Steinfelder |Back to [[:Teaching|Teaching]]