====== Bioinformatics Journal Club ======
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|392169 |Stoye, Dörr, Wittler, Sundermann |Summer 2012 |Thursday 18-20 in U10-146 |[[http://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=29618123|ekvv]] |

===== Topics =====

  * Classical Textbooks in Bioinformatics and Papers in Genetics 


===== Schedule =====

| **Date** | **Topic** | **Name** | **Article** |
| 12.04.2012 | Organizational Matters |
| 26.04.2012 | Textbooks | Daniel Dörr | R. Durbin, S. Eddy, A. Krogh, G. Mitchison: **Biological Sequence Analysis - Probabilistic models of protein and nucleic acids**. Cambridge University Press 1998. |
| 10.05.2012 | | Linda Sundermann | David W. Mount: **Bioinformatics - Sequence and Genome Analysis**. Cold Spring Harbor Laboratory Press 2001. |
| 15.05.2012 :!: | | Roland Wittler | Joseph Felsenstein: **Inferring Phylogenies**. Sinauer Associates 2004. |
| 24.05.2012 | Papers | Kai Stadermann | Jared T. Simpson and Richard Durbin: [[http://bioinformatics.oxfordjournals.org/content/26/12/i367.abstract|Efficient construction of an assembly string graph using the FM-index]]. //Bioinformatics// **26**, i367-i373, 2010. (Proc. of ISMB 2010) |
| 31.05.2012 | latest science | Jens Stoye | K. Jahn, H. Sudek, J. Stoye: **Maximum Common Intervals Revisited**. (What I'm currently doing.) |
| 14.06.2012 | Organizational Matters |
| 28.06.2012 | Papers | Jennifer Hess | W.E. Castle [[http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1091521/|Is the Arrangement of the Genes in the Chromosome Linear?]], A.H. Sturtevant et al. [[http://authors.library.caltech.edu/1513/1/STUpnas19.pdf|THE SPATIAL RELATIONS OF GENES]], W.E. Castle [[http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1091640/|Are Genes Linear or Non-Linear in Arrangement?]], and for ambitious readers: T.H. Morgan et al. [[http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1084455/|The Evidence for the Linear Order of the Genes]]|
| 12.07.2012 | Paper | Annelyse Thevenin | Seymour Benzer [[http://www.ncbi.nlm.nih.gov/pmc/articles/PMC222769|On the topology of the genetic fine structure]]|Back to [[:Teaching|Teaching]]