====== Bioinformatics Journal Club ======
\\ 


| 392172 |Feijão |Winter 2013/14 |Tuesday 18-20 in U10-155 |[[https://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=37774651|ekvv]] |

===== Contents =====
In this seminar we read and discuss current research articles from different fields in bioinformatics. 



===== Topics =====
To be decided 



===== Schedule =====

| **Date** | **Topic** | **Name** | **Article** |
| 10.10.2013 | Preliminaries | Pedro Feijão | -- |
| 15.10.2013 | -- | -- | -- |
| 22.10.2013 | -- | -- | -- |
| 29.10.2013 | Single-cell Hi-C reveals cell-to-cell variability in chromosome structure  | Annelyse Thévenin | [[http://www.nature.com/nature/journal/v502/n7469/full/nature12593.html|Nature]] |
| 05.11.2013 | Single-Cell DNA-Methylation Analysis Reveals Epigenetic Chimerism in Preimplantation Embryos. | Christina Ander | [[http://www.sciencemag.org/content/341/6150/1110.abstract|Science]] {{ 307Science-2013-Lorthongpanich-1110-2.pdf | [PDF] }} |
| 12.11.2013 | A sticker-based model for DNA computation | Fábio Martinez | [[http://www.ncbi.nlm.nih.gov/pubmed/10072080|Pubmed]]  {{ 307A Sticker Based Model for DNA Computation.pdf | [PDF] }} |
| 19.11.2013 | The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes | Jens Stoye | [[http://dx.doi.org/10.1038/nature01722|Nature]], [[http://dx.doi.org/10.1101/sqb.2009.74.048|Review article]] |
| 26.11.2013 | Using population admixture to help complete maps of the human genome | Daniel Dörr | [[http://www.nature.com/ng/journal/v45/n4/full/ng.2565.html|Nature Genetics]]  {{ 307ng.2565.pdf | [PDF] }} |
| 03.12.2013 | Identifying Personal Genomes by Surname Inference | Pedro Feijao | [[http://www.sciencemag.org/content/339/6117/321.long|Science]] {{ 307321.full.pdf | [PDF] }} |
| 10.12.2013 |  (christmas party)|  -- | -- |
| 17.12.2013 | Insights into the phylogeny and coding potential of microbial dark matter | Katharina Jahn | [[http://www.nature.com/nature/journal/vaop/ncurrent/full/nature12352.html|Nature]]  {{ 307nature12352.pdf | [PDF] }} |
| 07.01.2014 | Scheduling meeting |  | -- |
| 14.01.2014 | CRISPR screen identifies genes  | Annelyse Thévenin  |  |
| 21.01.2014 | Statistical inference of the generation probability of T-cell receptors from sequence repertoires | Pina Krell  | [[http://www.pnas.org/content/109/40/16161.full|PNAS]]  {{ 307PNAS-2012-Murugan-16161-6.pdf | [PDF] }} {{ 307PNAS-2012-Murugan-16161-6-Appendix.pdf | [Supp.] }} |
| 28.01.2014 | Widespread Recurrent Evolution of Genomic Features | Marilia Braga | [[http://gbe.oxfordjournals.org/content/4/4/486.long|Bioinformatics]]   {{ 307Genome Biol Evol-2012-Maeso-486-500.pdf | [PDF] }} |
| 04.02.2014 | The genomic landscape of Neanderthal ancestry in present-day humans | Tina Zekic  | [[http://www.nature.com/nature/journal/vaop/ncurrent/pdf/nature12961.pdf|Nature]] |Back to [[:Teaching|Teaching]]