====== Implementation of Algorithms (1Ü) ======

| 392231 | Wittler | Winter 2017/18 | Class hours by appointment | [[https://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=102497476|ekvv]] |

== Final presentation: ==

January 25, 2018, 14ct in U10-146

== Procedure: ==

Each participant implements a (simple) algorithm in a programming language of their own choice. Topics will be distributed individually: meet or send email to the organizer, a lecturer of any other class or seminar in the modules //Algorithms in Bioinformatics// or //Sequence Analysis//. The focus of the implementation shall be on code readability and optimal asymptotics, which ideally is verified by systematic testing.

The source code and some test data (where applicable) has to be sent to the organiser one week before the final presentation, i.e., January 18. During the final presentation, every participant runs and explains her/his software in front of everybody. If the result is not satisfactory, a correction can be provided until the end of the semester.


== Distributed topics: ==

^Topic ^Name ^Supervised by ^
| Center-Star Approximation | Timo | Tizian |
| Gotoh Algorithm | Steffi | Tizian |
| Sankoff's Algorithm | Sophia | Roland |
| Progressives Alignment | Ilja | Roland |
| Sellers Algorithm | Lena | Roland |
| Agglomeratives Clustering | Antonia | Roland |
| Hirschbergalgorithmus | Pia | Roland |
| Waterman-Algorithmus | Manuel | Tizian |
| BWT - Aufbau und Rückwärtssuche | Paul | Tizian |


Back to [[teaching:|Teaching]]