====== Genome Informatics Research Seminar (2S) ======
| [[https://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=423650098|392188]] | Stoye | Winter 2023/24 | Monday 14:15-15:45 in U10-146 |

==== Short Description ====
In this seminar, current research of the Genome Informatics group is reported. 

(In dieser Veranstaltung wird in Vorträgen über aktuelle Themen aus der Forschung der Arbeitsgruppe Genominformatik berichtet.)

==== Schedule ====
^ **Date** ^ **Topic** ^ **Name** ^
| 09.10.2023 | Organization of the seminar | Jens S |
| 16.10.2023 | Exceeding mutual exclusion bottlenecks in fork join parallelism on divisible data structures with application to highly parallel coloured de Bruijn graph construction (a.k.a. parallelizing SANS) | Fabian K |
| 23.10.2023 | -- | -- |
| 30.10.2023 | Panacus: Computing Pangenome Graph Statistics | Luca P |
| 06.11.2023 | (no class, visit of Fabian Hausmann) | -- |
| 13.11.2023 | Genome graph transformations | Antonia L |
| 20.11.2023 | (no class, many in Amsterdam) | -- |
| 27.11.2023 | capping-free SPP DCJ with indels | Leonard B |
| 04.12.2023 |k-mers based search engines for genomic sequencing data| Lucas R |
| 11.12.2023 | Inferred genomic, spatial and single cell hetereogeneity of human cancers | Franziska N |
| 18.12.2023 | (Christmas event) | -- |
| Winter break |||
| 08.01.2024 | An exact epsilon-match filter that is generalized to the application of k-mer sketches (that ensure a window guarantee) | Pina K |
| 15.01.2024 | Exceeding mutual exclusion bottlenecks in fork join parallelism on divisible data structures (v2) | Fabian K |
| 22.01.2024 | CARP  | Leonard B |
| 29.01.2024 | Implementation of Algorithms | several students |
| 11.03.2024 | A BWT-Based Algorithm for Random de Bruijn Sequence Construction | Luca P |