Selected Topics in Algorithmic Bioinformatics


392130 Lipták Winter 2008/2009 Wed 10-12, T2-149 ekvv

Organisational Matters

Lecture

Exercise Sessions

Timetable

No. Date Topic Exercise Sheet
1 15/10/2008 Overview, Introduction to Phylogenetics exercise1.pdf
2 22/10/2008 Phylogenetics: Distance-based methods exercise2.pdf
3 29/10/2008 Phylogenetics: Distance-based methods (cont.) exercise3.pdf
4 5/11/2008 Phylogenetics: Perfect Phylogeny exercise4.pdf
5 12/11/2008 Phylogenetics: PP (cont.) exercise5.pdf
6 19/11/2008 Phylogenetics: Small Parsimony exercise6.pdf
7 26/11/2007 Phylogenetics: Large Parsimony exercise7.pdf
8 3/12/2007 Lecture cancelled for attendance of Gene Myers' lecture in H13 exercise8.pdf
9 10/12/2008 NP completeness (Preliminary lecture notes of lectures 9 and 10) exercise9.pdf
10 17/12/2008 NP completeness (cont.) exercise10.pdf
11 7/1/2009 Probabilistic models (Preliminary lecture notes of lectures 11 to 13) exercise11.pdf
12 14/1/2009 Markov Chains and Hidden Markov Models exercise12.pdf
13 21/1/2008 HMMs: Algorithms exercise13.pdf
14 28/1/2008 The Money Changing Problem (slides)
15 4/2/2008 The big picture: What did we do, and how does it all fit? (Overview)