Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision
Previous revision
teaching:2020summer:compan [2020/05/05 17:19]
tischulz Added links to scientific writing material
teaching:2020summer:compan [2020/07/06 11:52] (current)
tischulz Removed Yannick from schedule
Line 17: Line 17:
 | 22.04. ​ | Preliminaries,​ topic selection |   | | 22.04. ​ | Preliminaries,​ topic selection |   |
 | 29.04. ​ | Intro to LaTeX, reading | {{ :​teaching:​2020summer:​compan:​template.tar | latex sources }}, {{ :​teaching:​2020summer:​compan:​reading.pdf | Slides: HowToRead ​ }} | | 29.04. ​ | Intro to LaTeX, reading | {{ :​teaching:​2020summer:​compan:​template.tar | latex sources }}, {{ :​teaching:​2020summer:​compan:​reading.pdf | Slides: HowToRead ​ }} |
-| 06.05. ​ | Scientific writing | {{ :​teaching:​2020summer:​compan:​scientificWriting ​| Slides: ScientificWriting }}, [[ https://​de.sharelatex.com/​learn/​bibtex_bibliography_styles | Bibliography Styles ]] | +| 06.05. ​ | Scientific writing | {{ :​teaching:​2020summer:​compan:​scientificwriting.pdf ​| Slides: ScientificWriting }}, [[ https://​de.sharelatex.com/​learn/​bibtex_bibliography_styles | Bibliography Styles ]] | 
-| 13.05. ​ | Introductions,​ conclusions |                                        +| 13.05. ​ | Introductions,​ conclusions | {{ :​teaching:​2020summer:​compan:​introsconclusions.pdf | Slides: IntroductionConclusions }} 
-| 20.05. ​ | Math |                     ​+| 20.05. ​ | Math | {{ :​teaching:​2020summer:​compan:​math_template.tar | latex sources }},  {{ :​teaching:​2020summer:​compan:​math.pdf | Slides: Math }}        ​
-| 27.05. ​ | Tables, figures, algorithms |                                                                                                                                                       ​+| 27.05. ​ | Tables, figures, algorithms | {{ :​teaching:​2020summer:​compan:​algo_template.tar | latex sources }},  {{ :​teaching:​2020summer:​compan:​tablesFiguresAlgos.pdf | Slides: TablesFiguresAlgorithms }} 
-| 03.06. ​ | Checklist, writing |                                                  +| 03.06. ​ | Checklist, writing | {{ :​teaching:​2020summer:​compan:​checklist.pdf | Slides: Checklist }} 
-| 10.06. ​ | Intro to presentations (in LaTeX Beamer) |                                                                                                                    |+| 10.06. ​ | Intro to presentations (in LaTeX Beamer) | {{:​teaching:​2020summer:​compan:​beamer_template.tar | latex sources }}, [[ http://​texdoc.net/​texmf-dist/​doc/​latex/​beamer/​beameruserguide.pdf | beamer class doku ]], {{:​teaching:​2020summer:​compan:​checklist_presentations.pdf | Slides: Presentation Checklist }} |
 | 17.06. ​ | presentations (1) |                                               | | 17.06. ​ | presentations (1) |                                               |
 | 24.06. ​ | presentations (2) |                                                                                                                    | | 24.06. ​ | presentations (2) |                                                                                                                    |
Line 41: Line 41:
 |  2   | Tizian ​ | {{ :​teaching:​2020summer:​compan:​bbw089.pdf ​ | Computational pan-genomics:​ status, promises and challenges }} | |  2   | Tizian ​ | {{ :​teaching:​2020summer:​compan:​bbw089.pdf ​ | Computational pan-genomics:​ status, promises and challenges }} |
 |   ​| ​ | [[ https://​almob.biomedcentral.com/​track/​pdf/​10.1186/​s13015-016-0066-8 | Bloom Filter Trie: an alignment-free and reference-free data structure for pan-genome storage ]] | |   ​| ​ | [[ https://​almob.biomedcentral.com/​track/​pdf/​10.1186/​s13015-016-0066-8 | Bloom Filter Trie: an alignment-free and reference-free data structure for pan-genome storage ]] |
-|  3  | Yannick ​ | [[ https://​www.biorxiv.org/​content/​10.1101/​695338v2.full.pdf | Bifrost - Highly parallel construction and indexing of colored and compacted de Bruijn graphs ]] |+|  3  | <del>Yannick</​del> ​ | [[ https://​www.biorxiv.org/​content/​10.1101/​695338v2.full.pdf | Bifrost - Highly parallel construction and indexing of colored and compacted de Bruijn graphs ]] |
 |  3  | Marvin ​ | [[ https://​www.biorxiv.org/​content/​10.1101/​234856v1.full.pdf | Sequence variation aware genome references and read mapping with the variation graph toolkit ]] | |  3  | Marvin ​ | [[ https://​www.biorxiv.org/​content/​10.1101/​234856v1.full.pdf | Sequence variation aware genome references and read mapping with the variation graph toolkit ]] |
 |  4  | Fabian ​ | [[ https://​www.liebertpub.com/​doi/​pdfplus/​10.1089/​cmb.2019.0309 | Efficient Construction of a Complete Index for Pan-Genomics Read Alignment ]] | |  4  | Fabian ​ | [[ https://​www.liebertpub.com/​doi/​pdfplus/​10.1089/​cmb.2019.0309 | Efficient Construction of a Complete Index for Pan-Genomics Read Alignment ]] |