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--- teaching:2020summer:journalclub [2020/02/25 15:18]
jstoye created
+++ teaching:2020summer:journalclub [2020/06/23 14:25] (current)
jstoye [Schedule]
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 ====== Bioinformatics Journal Club (2S) ======
+| [[https://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=200022058|392172]] | Stoye | Summer 2020 | Monday 16:00-17:30 <del>in U10-155</del> |
-| [https://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=200022058|392172]] | Stoye | Summer 2020 | Monday 16-18 in U10-155 |
+==== Contents ====
-===== Contents =====
 We read and discuss current research articles from different fields in computational biology. The specific topics will be selected at the beginning of the semester.
 To get credit points, students have to show proficiency in reading, discussing and presenting original research papers and other scientific literature.
-===== Schedule =====
+==== Schedule ====
 ^ **Date** ^ **Topic** ^ **Name** ^
-| 06.04.2020 | choosing a topic | all |
+| <del>06.04.2020</del> | -- | -- |
-| 13.04.2020 | | |
+| <del>13.04.2020</del> | (Easter Monday) | -- |
-| 20.04.2020 | | |
+| 20.04.2020 | topic selection | all |
-| 27.04.2020 | | |
+| **Viral phylogenetics** |||
-| 04.05.2020 | | |
+| 27.04.2020 | paper selection | all |
-| 11.05.2020 | | |
+| 04.05.2020 | [[https://doi.org/10.1016/j.tcs.2019.09.003|Displaying trees across two phylogenetic networks]] ([[http://www.math.canterbury.ac.nz/~c.semple/papers/DLS19a.pdf|alternative link]])| Leonard B |
-| 18.05.2020 | | |
+| 11.05.2020 | [[https://doi.org/10.1093/bioinformatics/bty407|Nextstrain]] and [[https://doi.org/10.1093/bioinformatics/btv381|Nextflu]] | Suada B |
-| 25.05.2020 | | |
+| 18.05.2020 | (continuation BREW rehearsals) | -- |
-| 01.06.2020 | | |
+| 25.05.2020 | (Jens away) | -- |
-| 08.06.2020 | | |
+| 01.06.2020 | (Whit Monday) | -- |
-| 15.06.2020 | | |
+| 08.06.2020 | [[https://doi.org/10.1093/molbev/msp077|FastTree]] | Roland W |
-| 22.06.2020 | | |
+| 15.06.2020 | [[https://doi.org/10.1093/ve/vex042|TreeTime]] | Tizian Sch |
-| 29.06.2020 | | |
+| 22.06.2020 | [[https://doi.org/10.1093/molbev/msu300|IQ-Tree]] | Jens S |
-| 06.07.2020 | | |
+| **Data analysis in bioinformatics** |||
-| 13.07.2020 | | |
+| 29.06.2020 | -- | -- |
+| 06.07.2020 | -- | -- |
+| 13.07.2020 | -- | -- |

Genome Informatics

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