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+ | ====== Bioinformatics Journal Club (2S) ====== | ||
+ | | [[https://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=152987077|392172]] | Stoye | Summer 2019 | Monday 16-18 in U10-155 | | ||
+ | ===== Contents ===== | ||
+ | |||
+ | We read and discuss current research articles from different fields in computational biology. The specific topics will be selected at the beginning of the semester. | ||
+ | |||
+ | To get credit points, students have to show proficiency in reading, discussing and presenting original research papers and other scientific literature. | ||
+ | |||
+ | ===== Schedule ===== | ||
+ | |||
+ | ^ **Date** ^ **Topic** ^ **Name** ^ | ||
+ | | 01.04.2019 | choosing a topic | all | | ||
+ | | 08.04.2019 | [[https://doi.org/10.1093/nar/gkx1126| JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework]] | Hussamadin M. Kadhim | | ||
+ | | 15.04.2019 | [[https://doi.org/10.1093/nar/gkw1069| The eukaryotic promoter database in its 30th year: focus on non-vertebrate organisms]]| Jens Stoye | | ||
+ | | 22.04.2019 | (Easter Monday) | -- | | ||
+ | | 29.04.2019 | [[https://courses.csail.mit.edu/6.851/fall17/lectures/L15.html| Eric Demaine, Advanced Data Structures, Lecture 15: Least Common & Level Ancestors]] | Fábio H. V. Martinez | | ||
+ | | 06.05.2019 | (CeBiTec Colloquium) | -- | | ||
+ | | 13.05.2019 | [[https://courses.csail.mit.edu/6.851/fall17/lectures/L15.html| Eric Demaine, Advanced Data Structures, Lecture 15: Least Common & Level Ancestors (cont'd)]] | Fábio H. V. Martinez | | ||
+ | | 20.05.2019 | [[https://courses.csail.mit.edu/6.851/fall17/lectures/L16.html| Eric Demaine, Advanced Data Structures, Lecture 16: Strings]] | Fábio H. V. Martinez | | ||
+ | | 27.05.2019 | [[https://courses.csail.mit.edu/6.851/fall17/lectures/L16.html| Eric Demaine, Advanced Data Structures, Lecture 16: Strings (cont'd)]]\\ [[https://courses.csail.mit.edu/6.851/fall17/lectures/L17.html| Eric Demaine, Advanced Data Structures, Lecture 17: Succinct Rank, Select, & Tries]] | Fábio H. V. Martinez | | ||
+ | | 03.06.2019 | [[https://courses.csail.mit.edu/6.851/fall17/lectures/L17.html| Eric Demaine, Advanced Data Structures, Lecture 17: Succinct Rank, Select, & Tries (cont'd)]] | Fábio H. V. Martinez | | ||
+ | | 10.06.2019 | (Whit Monday) | -- | | ||
+ | | 17.06.2019 | (Aggi Day) | -- | | ||
+ | | 24.06.2019 | [[https://doi.org/10.1101/596718|Influence of neighboring small sequence variants on functional impact prediction]] | Jan-Simon Baasner | | ||
+ | | 01.07.2019 | (Jens away) | -- | | ||
+ | | 08.07.2019 | [[https://arxiv.org/abs/1905.04165|Alignment- and reference-free phylogenomics with colored de-Bruijn graphs]] | Andreas Rempel | | ||
+ | |||
+ | Back to [[:teaching|Teaching]] |