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--- teaching:2019summer:journalclub [2019/07/02 17:00]
+++ teaching:2019summer:journalclub [2020/02/14 09:07] (current)
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+====== Bioinformatics Journal Club (2S) ======
+| [[https://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=152987077|392172]] | Stoye | Summer 2019 | Monday 16-18 in U10-155 |
+===== Contents =====
+We read and discuss current research articles from different fields in computational biology. The specific topics will be selected at the beginning of the semester.
+To get credit points, students have to show proficiency in reading, discussing and presenting original research papers and other scientific literature.
+===== Schedule =====
+^ **Date** ^ **Topic** ^ **Name** ^
+| 01.04.2019 | choosing a topic | all |
+| 08.04.2019 | [[https://doi.org/10.1093/nar/gkx1126| JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework]] | Hussamadin M. Kadhim |
+| 15.04.2019 | [[https://doi.org/10.1093/nar/gkw1069| The eukaryotic promoter database in its 30th year: focus on non-vertebrate organisms]]| Jens Stoye |
+| 22.04.2019 | (Easter Monday) | -- |
+| 29.04.2019 | [[https://courses.csail.mit.edu/6.851/fall17/lectures/L15.html| Eric Demaine, Advanced Data Structures, Lecture 15: Least Common & Level Ancestors]] | Fábio H. V. Martinez |
+| 06.05.2019 | (CeBiTec Colloquium) | -- |
+| 13.05.2019 | [[https://courses.csail.mit.edu/6.851/fall17/lectures/L15.html| Eric Demaine, Advanced Data Structures, Lecture 15: Least Common & Level Ancestors (cont'd)]] | Fábio H. V. Martinez |
+| 20.05.2019 | [[https://courses.csail.mit.edu/6.851/fall17/lectures/L16.html| Eric Demaine, Advanced Data Structures, Lecture 16: Strings]] | Fábio H. V. Martinez |
+| 27.05.2019 | [[https://courses.csail.mit.edu/6.851/fall17/lectures/L16.html| Eric Demaine, Advanced Data Structures, Lecture 16: Strings (cont'd)]]\\  [[https://courses.csail.mit.edu/6.851/fall17/lectures/L17.html| Eric Demaine, Advanced Data Structures, Lecture 17: Succinct Rank, Select, & Tries]] | Fábio H. V. Martinez |
+| 03.06.2019 | [[https://courses.csail.mit.edu/6.851/fall17/lectures/L17.html| Eric Demaine, Advanced Data Structures, Lecture 17: Succinct Rank, Select, & Tries (cont'd)]] | Fábio H. V. Martinez |
+| 10.06.2019 | (Whit Monday) | -- |
+| 17.06.2019 | (Aggi Day) | -- |
+| 24.06.2019 | [[https://doi.org/10.1101/596718|Influence of neighboring small sequence variants on functional impact prediction]] | Jan-Simon Baasner |
+| 01.07.2019 | (Jens away) | -- |
+| 08.07.2019 | [[https://arxiv.org/abs/1905.04165|Alignment- and reference-free phylogenomics with colored de-Bruijn graphs]] | Andreas Rempel |
+Back to [[:teaching|Teaching]]

Genome Informatics

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