This shows you the differences between two versions of the page.
Both sides previous revision Previous revision Next revision | Previous revision | ||
teaching:2020summer:bioappgere [2020/02/25 15:32] tischulz [Overview] |
teaching:2020summer:bioappgere [2020/03/17 10:22] tischulz Letzte Vorträge verteilt |
||
---|---|---|---|
Line 1: | Line 1: | ||
- | ====== Practical Course: Bioinformatics Applications in Genome Research ====== | + | ====== Practical Course: Bioinformatics Applications in Genome Research ====== |
\\ | \\ | ||
Line 17: | Line 17: | ||
| **Date** | **Topic** | **Presentation** | **Solution (for next day)** | | | **Date** | **Topic** | **Presentation** | **Solution (for next day)** | | ||
- | | Mon, 9.3. | Metagenomics | Tizian: //Metagenomics// | | | + | | Mon, 9.3. | Metagenomics | Tizian: //Metagenomics// | Fabienne | |
- | | Tue, 10.3. | Hi-C Data Analysis | TBA: //HiCUP// | | | + | | Tue, 10.3. | Hi-C Data Analysis | Leonard: //Hi-C// | Leonard | |
- | | Wed, 11.3. | Haplotype Inference I | TBA: //WhatsHap// | | | + | | Wed, 11.3. | Haplotype Inference I | Fabienne: //WhatsHap// | Lukas | |
- | | Thu, 12.3. | Haplotype Inference II | TBA: //Integer Linear Programs// | | | + | | Thu, 12.3. | Haplotype Inference II | Lukas: //Integer Linear Programs// | Leonard | |
- | | Fri, 13.3. | Assembly | TBA: //Genome Assembly, de Brujin Graphs// | | | + | | Fri, 13.3. | Assembly | Leonard: //Genome Assembly, de Brujin Graphs// | Fabienne | |
- | | Mon, 16.3. | Finishing | TBA: //BWA// | | | + | | Mon, 16.3. | Finishing | Fabienne: //BWA// | Lukas | |
- | | Tue, 17.3. | Genome rearrangements | TBA: //Rearrangement distances// | | | + | | Tue, 17.3. | Genome rearrangements | Lukas: //Rearrangement distances// | Fabienne | |
- | | Wed, 18.3. | Hidden Markov Models (HMMs) | TBA: //HMMs// | | | + | | Wed, 18.3. | Hidden Markov Models (HMMs) | Leonard: //HMMs// | Lukas | |
- | | Thu, 19.3. | Gene Prediction | TBA: //Gene Prediction (software: Glimmer, Prodigal)// | | | + | | Thu, 19.3. | Gene Prediction | Lukas: //Gene Prediction (software: Glimmer, Prodigal)// | Leonard | |
| Fri, 20.3. | Finishing the Circos plot | -- | -- | | | Fri, 20.3. | Finishing the Circos plot | -- | -- | | ||