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====== Bioinformatics Journal Club (2S) ====== | ====== Bioinformatics Journal Club (2S) ====== | ||
+ | | [[https://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=200022058|392172]] | Stoye | Summer 2020 | Monday 16:00-17:30 <del>in U10-155</del> | | ||
- | | [[https://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=200022058|392172]] | Stoye | Summer 2020 | Monday 16-18 in U10-155 | | + | ==== Contents ==== |
- | ===== Contents ===== | + | |
We read and discuss current research articles from different fields in computational biology. The specific topics will be selected at the beginning of the semester. | We read and discuss current research articles from different fields in computational biology. The specific topics will be selected at the beginning of the semester. | ||
To get credit points, students have to show proficiency in reading, discussing and presenting original research papers and other scientific literature. | To get credit points, students have to show proficiency in reading, discussing and presenting original research papers and other scientific literature. | ||
- | ===== Schedule ===== | + | ==== Schedule ==== |
^ **Date** ^ **Topic** ^ **Name** ^ | ^ **Date** ^ **Topic** ^ **Name** ^ | ||
- | | 06.04.2020 | choosing a topic | all | | + | | <del>06.04.2020</del> | -- | -- | |
- | | 13.04.2020 | | | | + | | <del>13.04.2020</del> | (Easter Monday) | -- | |
- | | 20.04.2020 | | | | + | | 20.04.2020 | topic selection | all | |
- | | 27.04.2020 | | | | + | | **Viral phylogenetics** ||| |
- | | 04.05.2020 | | | | + | | 27.04.2020 | paper selection | all | |
- | | 11.05.2020 | | | | + | | 04.05.2020 | [[https://doi.org/10.1016/j.tcs.2019.09.003|Displaying trees across two phylogenetic networks]] ([[http://www.math.canterbury.ac.nz/~c.semple/papers/DLS19a.pdf|alternative link]])| Leonard B | |
- | | 18.05.2020 | | | | + | | 11.05.2020 | [[https://doi.org/10.1093/bioinformatics/bty407|Nextstrain]] and [[https://doi.org/10.1093/bioinformatics/btv381|Nextflu]] | Suada B | |
- | | 25.05.2020 | | | | + | | 18.05.2020 | (continuation BREW rehearsals) | -- | |
- | | 01.06.2020 | | | | + | | 25.05.2020 | (Jens away) | -- | |
- | | 08.06.2020 | | | | + | | 01.06.2020 | (Whit Monday) | -- | |
- | | 15.06.2020 | | | | + | | 08.06.2020 | [[https://doi.org/10.1093/molbev/msp077|FastTree]] | Roland W | |
- | | 22.06.2020 | | | | + | | 15.06.2020 | [[https://doi.org/10.1093/ve/vex042|TreeTime]] | Tizian Sch | |
- | | 29.06.2020 | | | | + | | 22.06.2020 | [[https://doi.org/10.1093/molbev/msu300|IQ-Tree]] | Jens S | |
- | | 06.07.2020 | | | | + | | **Data analysis in bioinformatics** ||| |
- | | 13.07.2020 | | | | + | | 29.06.2020 | -- | -- | |
+ | | 06.07.2020 | -- | -- | | ||
+ | | 13.07.2020 | -- | -- | | ||