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teaching:2020winter:cg [2021/02/03 21:47]
mbraga [Schedule]
teaching:2020winter:cg [2021/02/11 09:57]
mbraga [Schedule]
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 | 14.01. | DCJ with duplicated genes (double-distance / balanced genomes) | {{teaching:​2020winter:​cg:​cg10.pdf | S10}} | {{teaching:​2020winter:​cg:​cg10-notes.pdf | SN10}} | [[https://​doi.org/​10.1186/​1471-2105-10-120|Tannier et al. 2009]] | {{teaching:​2020winter:​cg:​sheet10.pdf | Ex10}} | | 14.01. | DCJ with duplicated genes (double-distance / balanced genomes) | {{teaching:​2020winter:​cg:​cg10.pdf | S10}} | {{teaching:​2020winter:​cg:​cg10-notes.pdf | SN10}} | [[https://​doi.org/​10.1186/​1471-2105-10-120|Tannier et al. 2009]] | {{teaching:​2020winter:​cg:​sheet10.pdf | Ex10}} |
 | 21.01. | ILP / DCJ distance of balanced genomes | {{teaching:​2020winter:​cg:​cg11.pdf | S11}} | {{teaching:​2020winter:​cg:​cg11-notes.pdf | SN11}} | [[https://​doi.org/​10.1089/​cmb.2014.0096|Shao et al. 2015]] | {{teaching:​2020winter:​cg:​sheet11.pdf | Ex11}} | | 21.01. | ILP / DCJ distance of balanced genomes | {{teaching:​2020winter:​cg:​cg11.pdf | S11}} | {{teaching:​2020winter:​cg:​cg11-notes.pdf | SN11}} | [[https://​doi.org/​10.1089/​cmb.2014.0096|Shao et al. 2015]] | {{teaching:​2020winter:​cg:​sheet11.pdf | Ex11}} |
-| 28.01. | DCJ-indel distance of natural genomes\\ (guest lecture by L. Bohnenkämper) | {{teaching:​2020winter:​cg:​cg12.pdf | S12}} | | [[https://​doi.org/​10.1089/​cmb.2020.0434|Bohnenkämper et al. 2020]] | {{teaching:​2020winter:​cg:​sheet12.pdf | Ex12}} | +| 28.01. | DCJ-indel distance of natural genomes\\ (guest lecture by L. Bohnenkämper) | {{teaching:​2020winter:​cg:​cg12.pdf | S12}} | --- | [[https://​doi.org/​10.1089/​cmb.2020.0434|Bohnenkämper et al. 2020]] | {{teaching:​2020winter:​cg:​sheet12.pdf | Ex12}} | 
-| 04.02. | DCJ-indel distance of family-free genomes | {{teaching:​2020winter:​cg:​cg13.pdf | S13}} | | [[https://​doi.org/​10.4230/​LIPIcs.WABI.2020.3|Rubert et al. 2020]] | | +| 04.02. | DCJ distance and DCJ-indel distance\\ of family-free genomes | {{teaching:​2020winter:​cg:​cg13.pdf | S13}} | {{teaching:​2020winter:​cg:​cg13-notes.pdf | SN13}} ​| [[https://​doi.org/​10.4230/​LIPIcs.WABI.2020.3|Rubert et al. 2020]] | {{teaching:​2020winter:​cg:​sheet13.pdf | Ex13}} ​
-| 11.02. | t.b.a. | | | | |+| 11.02. | Small parsimony under SCJ / review | {{teaching:​2020winter:​cg:​cg14.pdf S14}} | | [[https://​doi.org/​10.1109/​TCBB.2011.34|Feijão & Meidanis 2011]] | --- |