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teaching:2024summer:cg [2024/05/06 07:36] rwittler |
teaching:2024summer:cg [2024/05/06 15:07] leonard [Schedule] |
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| 24.05. | Leonard | Inversion distance | [[https://doi.org/10.1145/300515.300516|Hannenhalli and Pevzner 1999]],\\ [[https://link.springer.com/chapter/10.1007/978-3-540-27801-6_29|Bergeron et al. 2004]] | | | | 24.05. | Leonard | Inversion distance | [[https://doi.org/10.1145/300515.300516|Hannenhalli and Pevzner 1999]],\\ [[https://link.springer.com/chapter/10.1007/978-3-540-27801-6_29|Bergeron et al. 2004]] | | | ||
| 31.05. | Leonard | Inversion distance/DCJ-indel distance | [[https://link.springer.com/chapter/10.1007/978-3-540-27801-6_29|Bergeron et al. 2004]],\\ [[https://doi.org/10.1089/cmb.2011.0118|Braga et al. 2011]] | | | | 31.05. | Leonard | Inversion distance/DCJ-indel distance | [[https://link.springer.com/chapter/10.1007/978-3-540-27801-6_29|Bergeron et al. 2004]],\\ [[https://doi.org/10.1089/cmb.2011.0118|Braga et al. 2011]] | | | ||
- | | 07.06. | Leonard | DCJ-indel distance | [[https://doi.org/10.1089/cmb.2011.0118|Braga et al. 2011]] | | | + | | 07.06. | Leonard | DCJ-indel distance | [[https://doi.org/10.1089/cmb.2011.0118|Braga et al. 2011]]\\ [[https://doi.org/10.1186/1748-7188-8-6|Compeau 2013]]\\ [[https://doi.org/10.1186/s13015-024-00253-7|Bohnenkämper 2024]]\\ (ignore ILP section)| | |
| 14.06. | Roland | Consistency of gene clusters | {{teaching:2023summer:cg:consistent_gene_clusters_slides.pdf | Slides}},\\ [[https://doi.org/10.1109/TCBB.2008.135|Stoye et al. 2009]],\\ [[https://doi.org/10.1089/cmb.2011.0083|Wittler et al. 2011]] | | | | 14.06. | Roland | Consistency of gene clusters | {{teaching:2023summer:cg:consistent_gene_clusters_slides.pdf | Slides}},\\ [[https://doi.org/10.1109/TCBB.2008.135|Stoye et al. 2009]],\\ [[https://doi.org/10.1089/cmb.2011.0083|Wittler et al. 2011]] | | | ||
| 21.06. | Leonard | Rearrangement problems on natural genomes | | | | 21.06. | Leonard | Rearrangement problems on natural genomes | | |