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teaching:2024summer:sa3 [2024/04/29 18:39] jstoye [Topics] |
teaching:2024summer:sa3 [2024/05/22 15:33] jstoye [Topics] |
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| 18.04.2024 | String matching | {{teaching:2024summer:sa3:exercises02StringMatching.pdf | Exercises 2}} | | | 18.04.2024 | String matching | {{teaching:2024summer:sa3:exercises02StringMatching.pdf | Exercises 2}} | | ||
| 25.04.2024 | Exact //k//-mer search (LR) | {{teaching:2024summer:sa3:exercises03kmers.pdf | Exercises 3}} | | | 25.04.2024 | Exact //k//-mer search (LR) | {{teaching:2024summer:sa3:exercises03kmers.pdf | Exercises 3}} | | ||
- | | 02.05.2024 | Suffix tree construction in linear time | | | + | | 02.05.2024 | Suffix tree construction in linear time | {{teaching:2024summer:sa3:exercises04SuffixTreeConstruction.pdf | Exercises 4}} | |
| 09.05.2024 | (Ascension Day) | -- | | | 09.05.2024 | (Ascension Day) | -- | | ||
- | | 16.05.2024 | Suffix array construction in liner time (LB) | | | + | | 16.05.2024 | Suffix array construction in liner time (LB) | {{teaching:2024summer:sa3:sa3-ex5.pdf | Exercises 5}} | |
- | | 23.05.2024 | BWT applications | | | + | | 23.05.2024 | BWT applications | {{teaching:2024summer:sa3:exercises06BwtApplications.pdf | Exercises 6}} | |
| 30.05.2024 | (Corpus Christi) | -- | | | 30.05.2024 | (Corpus Christi) | -- | | ||
| 06.06.2024 | Number of alignments | | | | 06.06.2024 | Number of alignments | | |