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--- teaching:2024summer:sa3 [2024/03/19 08:47]
jstoye created
+++ teaching:2024summer:sa3 [2024/05/01 17:08] (current)
jstoye [Topics]
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-| [[https://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=449953590|392105]]/[[https://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=449967587|06]] | Stoye, Robidou | Summer 2024 | Thu 9:00-10:30/10:30-12:00, U10-146 |
+| [[https://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=449953590|392105]]/[[https://ekvv.uni-bielefeld.de/kvv_publ/publ/vd?id=449967587|06]] | Stoye, Robidou | Summer 2024 | Thu 10:00-11:30/11:30-13:00, U10-146 |
 ===== Content =====
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 ===== Topics =====
-| **Date** | **Topic** | **Literature** | **Exercises** |
+| **Date** | **Topic** | **Exercises** |
-| 11.04.2024 | Introduction | Lothaire 1.0-1.2 | {{teaching:2024summer:sa3:exercises01introduction.pdf | Exercises 1}} |
+| 11.04.2024 | Basics | {{teaching:2024summer:sa3:exercises01Basics.pdf | Exercises 1}} |
-| 18.04.2024 | | | |
+| 18.04.2024 | String matching | {{teaching:2024summer:sa3:exercises02StringMatching.pdf | Exercises 2}} |
-| 25.04.2024 | ??? (L) | | |
+| 25.04.2024 | Exact //k//-mer search (LR) | {{teaching:2024summer:sa3:exercises03kmers.pdf | Exercises 3}} |
-| 02.05.2024 | | | |
+| 02.05.2024 | Suffix tree construction in linear time | {{teaching:2024summer:sa3:exercises04SuffixTreeConstruction.pdf | Exercises 4}} |
-| 09.05.2024 | (Ascension Day) | -- | -- |
+| 09.05.2024 | (Ascension Day) | -- |
-| 16.05.2024 | | | |
+| 16.05.2024 | Suffix array construction in liner time (LB) | |
-| 23.05.2024 | | | |
+| 23.05.2024 | BWT applications | |
-| 30.05.2024 | (Corpus Christi) | -- | -- |
+| 30.05.2024 | (Corpus Christi) | -- |
-| 06.06.2024 | | | |
+| 06.06.2024 | Number of alignments | |
-| 13.06.2024 | | | |
+| 13.06.2024 | Length-normalized alignment | |
-| 20.06.2024 | | | |
+| 20.06.2024 | Parametric alignment | |
-| 27.06.2024 | | | |
+| 27.06.2024 | How many squares can/must a string contain? | |
-| 04.07.2024 | | | |
+| 04.07.2024 | Finding and representing all tandem repeats in a string | |
-| 11.07.2024 | ??? (L) | | |
+| 11.07.2024 | ??? (LR) | |
-| 18.07.2024 | ??? (L) | | |
+| 18.07.2024 | ??? (LR) | |

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