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teaching:2025summer:cg [2025/06/28 08:25] jstoye [Schedule] |
teaching:2025summer:cg [2025/06/28 08:26] (current) jstoye [Schedule] |
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| 20.06.2025 (J) | DCJ-Indel of Natural Genomes | [[https://doi.org/10.1089/cmb.2020.0434|Bohnenkämper et al.]] | {{:teaching:2025summer:cg:cg_exercises-09.pdf|Exercises 9}} | | | 20.06.2025 (J) | DCJ-Indel of Natural Genomes | [[https://doi.org/10.1089/cmb.2020.0434|Bohnenkämper et al.]] | {{:teaching:2025summer:cg:cg_exercises-09.pdf|Exercises 9}} | | ||
| 27.06.2025 (M) | Family-free DCJ-indel distance | [[https://almob.biomedcentral.com/articles/10.1186/s13015-021-00183-8|Rubert et al.]], {{:teaching:2025summer:cg:balancednaturalfamilyfree.pdf|FF-DCJ-indel}} | {{:teaching:2025summer:cg:cg_exercises-10.pdf|Exercises 10}} | | | 27.06.2025 (M) | Family-free DCJ-indel distance | [[https://almob.biomedcentral.com/articles/10.1186/s13015-021-00183-8|Rubert et al.]], {{:teaching:2025summer:cg:balancednaturalfamilyfree.pdf|FF-DCJ-indel}} | {{:teaching:2025summer:cg:cg_exercises-10.pdf|Exercises 10}} | | ||
- | | 04.07.2025 (J) | Gene Clusters I: Common intervals of permutations | [[https://doi.org/10.1007/s004539910014|Uno & Yagiura]], [[https://doi.org/10.1007/s00453-009-9332-1|Heber et al.]]| | | + | | 04.07.2025 (J) | Gene Clusters I: Common intervals of permutations and strings | [[https://doi.org/10.1007/s004539910014|Uno & Yagiura]], [[https://doi.org/10.1007/s00453-009-9332-1|Heber et al.]], [[https://doi.org/10.1016/j.jda.2006.03.021|Didier et al.]] | | |
- | | 11.07.2025 (J) | Gene Clusters II: Common intervals of strings | [[https://doi.org/10.1016/j.jda.2006.03.021|Didier et al.]], [[https://doi.org/10.1089/cmb.2009.0098|Böcker et al.]], [[https://doi.org/10.1089/cmb.2011.0132|Jahn]] | | + | | 11.07.2025 (J) | Gene Clusters II: Approximate common intervals | [[https://doi.org/10.1089/cmb.2009.0098|Böcker et al.]], [[https://doi.org/10.1089/cmb.2011.0132|Jahn]] | |
| 18.07.2025 (J) | Gene Clusters III: Common intervals of indeterminate strings | [[https://doi.org/10.1186/1471-2164-15-S6-S2|Doerr et al.]] | | | | 18.07.2025 (J) | Gene Clusters III: Common intervals of indeterminate strings | [[https://doi.org/10.1186/1471-2164-15-S6-S2|Doerr et al.]] | | |