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--- teaching:2025summer:cg [2025/07/03 21:22]
jstoye [Algorithms in Comparative Genomics (2V + 2Ü)]
+++ teaching:2025summer:cg [2025/07/10 17:45] (current)
jstoye [Schedule]
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 | 13.06.2025 (J) | ILP for DCJ of balanced genomes | [[https://doi.org/10.1089/cmb.2014.0096|Shao et al.]] | {{:teaching:2025summer:cg:cg_exercises-08.pdf|Exercises 8}} |
 | 20.06.2025 (J) | DCJ-Indel of Natural Genomes | [[https://doi.org/10.1089/cmb.2020.0434|Bohnenkämper et al.]] | {{:teaching:2025summer:cg:cg_exercises-09.pdf|Exercises 9}} |
-| 27.06.2025 (M) | Family-free DCJ-indel distance | [[https://almob.biomedcentral.com/articles/10.1186/s13015-021-00183-8|Rubert et al.]], {{:teaching:2025summer:cg:balancednaturalfamilyfree.pdf|FF-DCJ-indel}} |  {{:teaching:2025summer:cg:cg_exercises-10.pdf|Exercises 10}} |
+| 27.06.2025 (M) | Family-free DCJ-indel distance | [[https://almob.biomedcentral.com/articles/10.1186/s13015-021-00183-8|Rubert et al.]], {{:teaching:2025summer:cg:balancednaturalfamilyfree.pdf|FF-DCJ-indel}} | {{:teaching:2025summer:cg:cg_exercises-10.pdf|Exercises 10}} |
-| 04.07.2025 (J) | Gene Clusters I: Common intervals of permutations and strings | [[https://doi.org/10.1007/s004539910014|Uno & Yagiura]], [[https://doi.org/10.1007/s00453-009-9332-1|Heber et al.]], [[https://doi.org/10.1016/j.jda.2006.03.021|Didier et al.]] | |
+| 04.07.2025 (J) | Gene Clusters I: Common intervals of permutations and strings | [[https://doi.org/10.1007/s004539910014|Uno & Yagiura]], [[https://doi.org/10.1007/s00453-009-9332-1|Heber et al.]], [[https://doi.org/10.1016/j.jda.2006.03.021|Didier et al.]] | {{:teaching:2025summer:cg:CG_exercises-11.pdf|Exercises 11}} |
-| 11.07.2025 (J) | Gene Clusters II: Approximate common intervals | [[https://doi.org/10.1089/cmb.2009.0098|Böcker et al.]], [[https://doi.org/10.1089/cmb.2011.0132|Jahn]] |
+| 11.07.2025 (J) | Gene Clusters II: Approximate common intervals | [[https://doi.org/10.1089/cmb.2009.0098|Böcker et al.]], [[https://doi.org/10.1089/cmb.2011.0132|Jahn]] | {{:teaching:2025summer:cg:CG_exercises-12.pdf|Exercises 12}} |
-| 18.07.2025 (J) | Gene Clusters III: Common intervals of indeterminate strings | [[https://doi.org/10.1186/1471-2164-15-S6-S2|Doerr et al.]] | |
+| 18.07.2025 (J) | Gene Clusters III: Common intervals of indeterminate strings | [[https://doi.org/10.1186/1471-2164-15-S6-S2|Doerr et al.]] | -- |

Genome Informatics

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