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teaching:2026summer:cg [2026/06/26 09:10]
rwittler [Schedule]
teaching:2026summer:cg [2026/07/24 12:27] (current)
rwittler [Schedule]
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 | 19.06. | Marilia | DCJ-indel distance | [[https://​doi.org/​10.1089/​cmb.2011.0118|Braga et al. 2011]] | {{teaching:​2026summer:​cg:​sheet09.pdf | Sheet 09}} | | 19.06. | Marilia | DCJ-indel distance | [[https://​doi.org/​10.1089/​cmb.2011.0118|Braga et al. 2011]] | {{teaching:​2026summer:​cg:​sheet09.pdf | Sheet 09}} |
 | 26.06. | Roland | Consistency of gene clusters | {{teaching:​2023summer:​cg:​consistent_gene_clusters_slides.pdf | Slides}},\\ [[https://​doi.org/​10.1109/​TCBB.2008.135|Stoye et al. 2009]],\\ [[https://​doi.org/​10.1089/​cmb.2011.0083|Wittler et al. 2011]],\\ {{https://​n-coder.github.io/​pqtree.js|PQ- & PC-Trees applet, D. Peters and S. D. Fink}}| {{teaching:​2026summer:​cg:​sheet10.pdf | Sheet 10}} | | 26.06. | Roland | Consistency of gene clusters | {{teaching:​2023summer:​cg:​consistent_gene_clusters_slides.pdf | Slides}},\\ [[https://​doi.org/​10.1109/​TCBB.2008.135|Stoye et al. 2009]],\\ [[https://​doi.org/​10.1089/​cmb.2011.0083|Wittler et al. 2011]],\\ {{https://​n-coder.github.io/​pqtree.js|PQ- & PC-Trees applet, D. Peters and S. D. Fink}}| {{teaching:​2026summer:​cg:​sheet10.pdf | Sheet 10}} |
-| 03.07. | Roland | Generators for common intervals | [[https://​doi.org/​10.1137/​060651331|Bergeron et al. 2008]], Sections 1 and 2 | | +| 03.07. | Roland | Generators for common intervals | [[https://​doi.org/​10.1137/​060651331|Bergeron et al. 2008]], Sections 1 and 2 | {{teaching:​2026summer:​cg:​sheet11.pdf | Sheet 11}} 
-| 10.07. | Roland | Generators, strong common intervals and PQ-trees | see above, Sections 3, 4, 5.1, and 5.3 |  | +| 10.07. | Roland | Generators, strong common intervals and PQ-trees | see above, Sections 3, 4, 5.1, and 5.3 | {{teaching:​2026summer:​cg:​sheet12.pdf | Sheet 12}}  | 
-07.07. | Roland | Common intervals of strings | [[https://​doi.org/​10.1016/​j.jda.2006.03.021|Didier at al., 2006]],\\ {{teaching:​2023summer:​cg:​didier.pdf | Dany Doerr'​s notes}} |  | +17.07. | Roland | Common intervals of strings | [[https://​doi.org/​10.1016/​j.jda.2006.03.021|Didier at al., 2006]],\\ {{teaching:​2023summer:​cg:​didier.pdf | Dany Doerr'​s notes}} | {{teaching:​2026summer:​cg:​sheet13.pdf | Sheet 13}}  | 
-17.07. | Roland | Common intervals of indeterminate strings | [[https://​pub.uni-bielefeld.de/​download/​2902049/​2902050/​PhDThesis.pdf|Doerr,​ PhD thesis 2016]] | |+24.07. | Roland | Common intervals of indeterminate strings | [[https://​pub.uni-bielefeld.de/​download/​2902049/​2902050/​PhDThesis.pdf|Doerr,​ PhD thesis 2016]],\\  {{teaching:​2026summer:​cg:​ff.pdf | slides}} ​  ​|