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teaching:alggrliterature [2019/02/10 14:33]
Marília Dias Vieira Braga [Genome assembly I: Clone-by-clone and whole-genome shotgun assembly]
teaching:alggrliterature [2019/10/24 10:06] (current)
Marília Dias Vieira Braga [Genome assembly I: Clone-by-clone and whole-genome shotgun assembly]
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   - F. Alizadeh, R. M. Karp, L. A. Newberg, and D. K. Weisser. [[http://​dx.doi.org/​10.1007/​BF01188581|Physical mapping of chromosomes:​ A combinatorial problem in molecular biology]]. //​Algorithmica//​ **13**(1/​2):​52-76,​ 1995.    - F. Alizadeh, R. M. Karp, L. A. Newberg, and D. K. Weisser. [[http://​dx.doi.org/​10.1007/​BF01188581|Physical mapping of chromosomes:​ A combinatorial problem in molecular biology]]. //​Algorithmica//​ **13**(1/​2):​52-76,​ 1995. 
   - S. Heber, J. Stoye, M. Frohme, J. Hoheisel, and M. Vingron. [[http://​dx.doi.org/​10.1089/​106652700750050853|Contig selection in physical mapping]]. //J. Comp. Biol.// **7**(3/​4):​395-408,​ 2000.    - S. Heber, J. Stoye, M. Frohme, J. Hoheisel, and M. Vingron. [[http://​dx.doi.org/​10.1089/​106652700750050853|Contig selection in physical mapping]]. //J. Comp. Biol.// **7**(3/​4):​395-408,​ 2000. 
-==== Genome assembly I: Clone-by-clone and whole-genome shotgun assembly ==== +==== Genome assembly I: Overlap-Layout-Consensus - Clone-by-clone and whole-genome shotgun assembly ==== 
-A good algorithmic description of the method ​is contained in the [[http://​www-ab.informatik.uni-tuebingen.de/​teaching/​ws09/​bioinformatics-i/​11-assembly.pdf|lecture notes by Daniel Huson]]. There you find also references ​to the original papers+ 
 +document with a good algorithmic description of the method ​will be published here soon. 
 + 
 +References ​to the original papers ​(to be completed):
  
 Lander-Waterman Statistics: Lander-Waterman Statistics:
teaching/alggrliterature.txt · Last modified: 2019/10/24 10:06 by Marília Dias Vieira Braga