Arbeitsgruppenseminar Genominformatik Sommersemester 2008

392188 Hoffmann, Stoye Summer 2008 Thursday 16-18 in U10-146 ekvv

Course Description

In this seminar, current topics of the Genome Informatics research group are presented.

(In dieser Veranstaltung wird in Vorträgen über aktuelle Themen aus der Forschung der Arbeitsgruppe Genominformatik berichtet.)


Date Name Topic
April 10th, 2008 Janna Berkemann, Péter Erdõs Bachelor thesis kickoff: …, New developments in the mathematics of phylogeny
April 24th, 2008 Wolfgang Gerlach, Nils Hoffmann BREW 2008 rehearsal: Taxonomical and Functional Characterization of Ultra-Short Reads from Microbial Metagenomes using the q-Gram Index, BREW 2008 rehearsal: Dynamic Time Warping in Chromatography Mass-Spectrometry
April 30th, 2008 Johannes Linnemann Diploma thesis presentation: Robustness of genomes under inversion
May 8th, 2008 Roland Wittler Jurassic Genomics
May 15th, 2008 Alexander Bunkowski, Sita Lange Visualization, Alignment and Data Mining for MCC/IMS Signals, Master thesis presentation: FORCE2 - A Weighted Graph Cluster Editing Tool using Layout-Based Heuristics
May 29th, 2008 Julia Zakotnik CPM 2008 rehearsal: HP Distance via Double Cut and Join Distance, COCOON 2008 rehearsal: Genome Halving under DCJ revisited
June 5th, 2008 Gero Doose, Phillip Torkler, Sören Müller Bachelor thesis presentation: …
June 12th, 2008 Epameinondas, Fritzilas, Jose, Amgarten, Quitzau COCOON 2008 rehearsal: Structural Identifiability in Low-Rank Matrix Factorization, WABI 2008 rehearsal: Detecting Repeat Families in Incompletely Sequenced Genoes
June 26th, 2008 Jan Baumbach IB08 rehearsal: MoRAine - A web server for fast computational transcription factor binding motif re-annotation
July 3rd, 2008 Kai Engelmann, Yoan Diekmann Bachelor thesis kickoff: Mure-Cola - Multiple Reference Contig Layout, Diploma thesis presentation: An Algorithm for Approximate Gene Cluster Detection
July 10th, 2008 Léon Kuchenbecker, Peter Husemann Bachelor thesis kickoff: Center Gene Clusters, Contig Mapping using a q-Gram Index
July 15th, 2008, 11:15 Wolfgang Gerlach ISMB SHORT-SIG Rehearsal: Taxonomical and Functional Characterization of Ultra-Short Reads From Microbial Metagenomes and Examination of Mate-Pairs
July 17th, 2008 Sebastian Oehm, Martin Riese Comparative metabolic pathway analysis, Bachelor thesis presentation: …
July 31st, 2008 Marcin Kaminski The game of Cops and Robber on graphs
August 7th, 2008 Martin Milanic MFCS Rehearsal: The Maximum Independent Set Problem in Planar Graphs
September 25th, 2008 Patrick Schwientek Master thesis presentation: Genome scale expression analysis of left ventricular assist devices (VAD) pre and post mechanical unloading