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Algorithms in Genome Research

392109/10 Braga, Dörr Winter 2019/20 Fr 9:00-10:30 and 10:30-12:00 in U10-146


This class covers the basic algorithmic techniques used in the computational analysis of genome and post-genome data. This includes algorithms for genomic mapping and assembly, methods for functional genome annotation (gene finding and gene function prediction), algorithms for the analysis of DNA microarrays and mass spectra, methods and models for protein structure prediction, and algorithms for comparative genomics.


The page AlgGRLiterature contains many links to the original literature.

Time table

Date Topic Exercises
11.10.2019 Introduction, logistics (M)
18.10.2019 Genome Assembly 1 (M)
25.10.2019 Genome Assembly 2 (M)
01.11.2019 (Allerheiligen)
08.11.2019 Genome Assembly 3 (M)
15.11.2019 (D)
22.11.2019 (D)
29.11.2019 (D)
06.12.2019 (D)
13.12.2019 (D)
20.12.2019 (D)
(X-mas break)
10.01.2020 (D)
17.01.2020 (M)
24.01.2020 (M)
31.01.2020 (M)

Examination dates


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teaching/2019winter/alggr.txt · Last modified: 2019/10/10 09:51 by Marília Dias Vieira Braga