392169 | Feijão | Summer 2013 | Thursday 18-20 in U10-155 | ekvv |
In this seminar we read and discuss current research articles from different fields in bioinformatics.
This semester, the articles will be selected from the Algorithmica Journal, and we will focus on articles with 100+ citations. We are using two citations databases to find the most cited papers:
Date | Topic | Name | Article |
11.04.2013 | Preliminaries | Pedro Feijão | — |
18.04.2013 | Algorithmica papers with 100+ citations | Roland Wittler | Fortune, S. (1987). A sweepline algorithm for Voronoi diagrams. Algorithmica, 2(1-4), 153–174. [PDF] |
25.04.2013 | Algorithmica papers with 100+ citations | Annelyse Thévenin | Ukkonen, E. (1995). On-line construction of suffix trees. Algorithmica, 14(3), 249–260. [PDF] |
02.05.2013 | (too close to a holiday) | — | — |
09.05.2013 | (Himmelfahrt) | — | — |
16.05.2013 | Algorithmica papers with 100+ citations | Pedro Feijão | Myers, E. (1986). An O(ND) difference algorithm and its variations. Algorithmica, 1(1-4), 251–266. [PDF] |
23.05.2013 | Algorithmica papers with 100+ citations | — | Postponed to 20.06 |
30.05.2013 | (Fronleichnam) | — | — |
06.06.2013 | Algorithmica papers with 100+ citations | Christina Ander | Chew, L. (1989). Constrained delaunay triangulations. Algorithmica, (1-4), 97–108. [PDF] |
13.06.2013 | Algorithmica papers with 100+ citations | Jens Stoye | Kececioglu, J. & Sankoff, D. (1995). Exact and approximation algorithms for sorting by reversals, with application to genome rearrangement. Algorithmica, 13(1/2), 180-210. [PDF] |
20.06.2013 | Algorithmica papers with 100+ citations | Kai Bernd Stadermann | Nagamochi, H., & Ibaraki, T. (1992). A linear-time algorithm for finding a sparse k-connected spanning subgraph of a k-connected graph. Algorithmica, 7, 583–596. [PDF] |
27.06.2013 | — | — | — |
04.07.2013 | Algorithmica papers with 100+ citations | Daniel Dörr | Feige, U., Peleg, D., & Kortsarz, G. (2001). The Dense k -Subgraph Problem. Algorithmica, 29(3), 410–421. [PDF] |
11.07.2013 | (AGGI Sommerausflug) | — | — |
18.07.2013 | (DiDy Application Workshop) | — | — |
26.09.2013 | — | Katharina Jahn | Combinatorial algorithms for DNA sequence assembly, J. D. Kececioglu, E. W. Myers, Algorithmica, February 1995, Volume 13, Issue 1-2, pp 7-51 [PDF] |